IL_6I9R_054

3D structure

PDB id

6I9R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCGAAAC*GUGAUAGCUG

Length

17 nucleotides

Bulged bases

6I9R|1|A|G|2011, 6I9R|1|A|G|2015

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I9R|1|A|C|1904
6I9R|1|A|C|1905
6I9R|1|A|G|1906
6I9R|1|A|A|1907
6I9R|1|A|A|1908
6I9R|1|A|A|1909
6I9R|1|A|C|1910
*
6I9R|1|A|G|2009
6I9R|1|A|U|2010
6I9R|1|A|G|2011
6I9R|1|A|A|2012
6I9R|1|A|U|2013
6I9R|1|A|A|2014
6I9R|1|A|G|2015
6I9R|1|A|C|2016
6I9R|1|A|U|2017
6I9R|1|A|G|2018

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

39S ribosomal protein L4, mitochondrial

Chain M

39S ribosomal protein L15, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial