IL_6I9R_056

3D structure

PDB id

6I9R (explore in PDB, NAKB, or RNA 3D Hub)

Description

Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

GCCCA*UACCCUCAC

Length

14 nucleotides

Bulged bases

6I9R|1|A|C|2414

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I9R|1|A|G|2377
6I9R|1|A|C|2378
6I9R|1|A|C|2379
6I9R|1|A|C|2380
6I9R|1|A|A|2381
*
6I9R|1|A|U|2411
6I9R|1|A|A|2412
6I9R|1|A|C|2413
6I9R|1|A|C|2414
6I9R|1|A|C|2415
6I9R|1|A|U|2416
6I9R|1|A|C|2417
6I9R|1|A|A|2418
6I9R|1|A|C|2419

Current chains

Chain A

16S rRNA

Nearby chains

Chain 5

39S ribosomal protein L37, mitochondrial

Chain 9

39S ribosomal protein L41, mitochondrial

Chain U

39S ribosomal protein L23, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial