IL_6I9R_058
3D structure
- PDB id
- 6I9R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Large subunit of the human mitochondrial ribosome in complex with Virginiamycin M and Quinupristin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 6I9R|1|A|G|2655
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6I9R_058 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.1582
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.2
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
6I9R|1|A|G|2470
6I9R|1|A|G|2471
6I9R|1|A|A|2472
6I9R|1|A|A|2473
6I9R|1|A|C|2474
6I9R|1|A|U|2475
6I9R|1|A|C|2476
6I9R|1|A|G|2477
6I9R|1|A|G|2478
*
6I9R|1|A|C|2653
6I9R|1|A|U|2654
6I9R|1|A|G|2655
6I9R|1|A|U|2656
6I9R|1|A|C|2657
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain E
- 39S ribosomal protein L3, mitochondrial
- Chain L
- 39S ribosomal protein L14, mitochondrial
- Chain Q
- 39S ribosomal protein L19, mitochondrial
Coloring options: