IL_6ICZ_014
3D structure
- PDB id
- 6ICZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human post-catalytic spliceosome (P complex) at 3.0 angstrom
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUG*CUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ICZ_014 not in the Motif Atlas
- Geometric match to IL_4ZC7_004
- Geometric discrepancy: 0.1109
- The information below is about IL_4ZC7_004
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_01003.6
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 241
Unit IDs
6ICZ|1|F|G|88
6ICZ|1|F|U|89
6ICZ|1|F|G|90
*
6ICZ|1|H|C|8
6ICZ|1|H|U|9
6ICZ|1|H|C|10
Current chains
- Chain F
- U6snRNA
- Chain H
- U2snRNA
Nearby chains
- Chain L
- Cell division cycle 5-like protein
- Chain M
- Pre-mRNA-splicing factor SYF2
Coloring options: