IL_6ID0_011
3D structure
- PDB id
- 6ID0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human intron lariat spliceosome prior to Prp43 loaded (ILS1 complex) at 2.9 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAACGAU*GCCUAGC
- Length
- 15 nucleotides
- Bulged bases
- 6ID0|1|F|C|37, 6ID0|1|G|A|11, 6ID0|1|G|G|12
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6ID0|1|F|G|33
6ID0|1|F|G|34
6ID0|1|F|A|35
6ID0|1|F|A|36
6ID0|1|F|C|37
6ID0|1|F|G|38
6ID0|1|F|A|39
6ID0|1|F|U|40
*
6ID0|1|G|G|7
6ID0|1|G|C|8
6ID0|1|G|C|9
6ID0|1|G|U|10
6ID0|1|G|A|11
6ID0|1|G|G|12
6ID0|1|G|C|13
Current chains
- Chain F
- U6snRNA
- Chain G
- pre-mRNA
Nearby chains
- Chain A
- Pre-mRNA-processing-splicing factor 8
- Chain J
- Crooked neck-like protein 1
- Chain L
- Cell division cycle 5-like protein
- Chain O
- Pre-mRNA-splicing factor RBM22
- Chain U
- CWF19-like protein 2
- Chain W
- Pre-mRNA-processing factor 17
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