IL_6IZP_006

3D structure

PDB id

6IZP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of the complex of naphthyridine carbamate dimer and an RNA with UGGAA-UGGAA pentad

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

UGGAA*UGGAA

Length

10 nucleotides

Bulged bases

6IZP|6|A|G|6, 6IZP|6|A|A|8, 6IZP|6|A|G|22, 6IZP|6|A|A|24

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6IZP|6|A|U|5
6IZP|6|A|G|6
6IZP|6|A|G|7
6IZP|6|A|A|8
6IZP|6|A|A|9
*
6IZP|6|A|U|21
6IZP|6|A|G|22
6IZP|6|A|G|23
6IZP|6|A|A|24
6IZP|6|A|A|25

Current chains

Chain A

RNA (29-MER)

Nearby chains