IL_6K0B_022

3D structure

PDB id

6K0B (explore in PDB, NAKB, or RNA 3D Hub)

Description

cryo-EM structure of archaeal Ribonuclease P with mature tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

4.3 Å

Loop

Sequence

CAGCAGAAACGACAC*GGUGAAACGGG

Length

26 nucleotides

Bulged bases

6K0B|1|Y|G|160

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6K0B|1|Y|C|92
6K0B|1|Y|A|93
6K0B|1|Y|G|94
6K0B|1|Y|C|95
6K0B|1|Y|A|96
6K0B|1|Y|G|97
6K0B|1|Y|A|98
6K0B|1|Y|A|99
6K0B|1|Y|A|100
6K0B|1|Y|C|101
6K0B|1|Y|G|102
6K0B|1|Y|A|103
6K0B|1|Y|C|104
6K0B|1|Y|A|105
6K0B|1|Y|C|106
*
6K0B|1|Y|G|159
6K0B|1|Y|G|160
6K0B|1|Y|U|161
6K0B|1|Y|G|162
6K0B|1|Y|A|163
6K0B|1|Y|A|164
6K0B|1|Y|A|165
6K0B|1|Y|C|166
6K0B|1|Y|G|167
6K0B|1|Y|G|168
6K0B|1|Y|G|169

Current chains

Chain Y

RPR

Nearby chains

Chain H

Ribonuclease P protein component 4

Chain J

50S ribosomal protein L7Ae

Chain V

Transfer RNA; tRNA