IL_6KE6_025

3D structure

PDB id

6KE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GCGAUA*UGGAACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6KE6|1|5A|G|402
6KE6|1|5A|C|403
6KE6|1|5A|G|404
6KE6|1|5A|A|405
6KE6|1|5A|U|406
6KE6|1|5A|A|407
*
6KE6|1|5A|U|449
6KE6|1|5A|G|450
6KE6|1|5A|G|451
6KE6|1|5A|A|452
6KE6|1|5A|A|453
6KE6|1|5A|C|454
6KE6|1|5A|C|455

Current chains

Chain 5A

5' ETS

Nearby chains

Chain 5D

U3 small nucleolar RNA-associated protein 11

Chain 5J

rRNA-processing protein FCF2

Chain RJ

Ribosome biogenesis protein BMS1