IL_6KE6_051
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUCGA*UG
- Length
- 8 nucleotides
- Bulged bases
- 6KE6|1|SA|U|320, 6KE6|1|SA|C|321
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6KE6_051 not in the Motif Atlas
- Geometric match to IL_5Y58_001
- Geometric discrepancy: 0.3212
- The information below is about IL_5Y58_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_37738.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6KE6|1|SA|U|318
6KE6|1|SA|U|319
6KE6|1|SA|U|320
6KE6|1|SA|C|321
6KE6|1|SA|G|322
6KE6|1|SA|A|323
*
6KE6|1|SA|U|345
6KE6|1|SA|G|346
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RA
- Ribosome biogenesis protein ENP2
- Chain RC
- KRR1 small subunit processome component
- Chain SJ
- 40S ribosomal protein S8-A
- Chain SM
- 40S ribosomal protein S11-A
- Chain X1
- Unassigned helices
Coloring options: