IL_6KE6_063

3D structure

PDB id

6KE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

ACUG*CUUGAU

Length

10 nucleotides

Bulged bases

6KE6|1|SA|U|638, 6KE6|1|SA|U|693, 6KE6|1|SA|U|857, 6KE6|1|SA|G|858, 6KE6|1|SA|A|859

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6KE6|1|SA|A|636
6KE6|1|SA|C|637
6KE6|1|SA|U|638
6KE6|1|SA|G|642
*
6KE6|1|SA|C|692
6KE6|1|SA|U|693
6KE6|1|SA|U|857
6KE6|1|SA|G|858
6KE6|1|SA|A|859
6KE6|1|SA|U|860

Current chains

Chain SA

18S rRNA

Nearby chains

Chain SI

40S ribosomal protein S7-A

Chain SO

40S ribosomal protein S13

Chain SX

40S ribosomal protein S22-B