IL_6KE6_073
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GACUA*UUAC
- Length
- 9 nucleotides
- Bulged bases
- 6KE6|1|SA|A|1036
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6KE6_073 not in the Motif Atlas
- Geometric match to IL_5TBW_041
- Geometric discrepancy: 0.236
- The information below is about IL_5TBW_041
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6KE6|1|SA|G|1035
6KE6|1|SA|A|1036
6KE6|1|SA|C|1037
6KE6|1|SA|U|1038
6KE6|1|SA|A|1039
*
6KE6|1|SA|U|1079
6KE6|1|SA|U|1080
6KE6|1|SA|A|1081
6KE6|1|SA|C|1082
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain 5I
- Protein SOF1
- Chain 5K
- rRNA-processing protein FCF1
- Chain RV
- Protein FAF1
- Chain SX
- 40S ribosomal protein S22-B
- Chain Sc
- 40S ribosomal protein S27-A
Coloring options: