IL_6KE6_090

3D structure

PDB id

6KE6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGG*CU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6KE6_090 not in the Motif Atlas

Geometric match to IL_7A0S_054

Geometric discrepancy: 0.1634

The information below is about IL_7A0S_054

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_26793.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

16

Unit IDs

6KE6|1|SA|G|1697
6KE6|1|SA|G|1698
6KE6|1|SA|G|1699
*
6KE6|1|SA|C|1703
6KE6|1|SA|U|1704

Current chains

Chain SA

18S rRNA

Nearby chains

Chain RE

U3 small nucleolar RNA-associated protein 22