IL_6KE6_097
3D structure
- PDB id
- 6KE6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 3.4 angstrom cryo-EM structure of yeast 90S small subunit preribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UAUAAG*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 6KE6|1|SA|U|66, 6KE6|1|SA|A|68
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6KE6_097 not in the Motif Atlas
- Homologous match to IL_8C3A_398
- Geometric discrepancy: 0.4793
- The information below is about IL_8C3A_398
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_34063.1
- Basepair signature
- cWW-tSH-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6KE6|1|SA|U|64
6KE6|1|SA|A|65
6KE6|1|SA|U|66
6KE6|1|SA|A|67
6KE6|1|SA|A|68
6KE6|1|SA|G|69
*
6KE6|1|SA|U|82
6KE6|1|SA|G|83
6KE6|1|SA|A|84
6KE6|1|SA|A|85
6KE6|1|SA|A|86
Current chains
- Chain SA
- 18S rRNA
Nearby chains
- Chain RL
- RNA cytidine acetyltransferase
- Chain RP
- U3 small nucleolar RNA-associated protein 20
- Chain SZ
- 40S ribosomal protein S24-A
Coloring options: