IL_6KOP_001
3D structure
- PDB id
- 6KOP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium tuberculosis initial transcription complex comprising sigma H and 5'-OH RNA of 9 nt
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CAC*GTG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6KOP|1|G|DC|14
6KOP|1|G|DA|15
6KOP|1|G|DC|16
*
6KOP|1|H|DG|8
6KOP|1|H|DT|9
6KOP|1|H|DG|10
Current chains
- Chain G
- DNA (5'-D(*TP*TP*GP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*A)-3')
- Chain H
- DNA (5'-D(*TP*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*GP*TP*G)-3')
Nearby chains
- Chain C
- DNA-directed RNA polymerase subunit beta
- Chain D
- DNA-directed RNA polymerase subunit beta'
Coloring options: