IL_6KQL_002
3D structure
- PDB id
- 6KQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus initial transcription complex comprising sigma A and 5'-triphosphate RNA of 4 nt
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.89 Å
Loop
- Sequence
- GTG*CAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6KQL|1|G|DG|10
6KQL|1|G|DT|11
6KQL|1|G|DG|12
*
6KQL|1|H|DC|16
6KQL|1|H|DA|17
6KQL|1|H|DC|18
Current chains
- Chain G
- DNA (5'-D(*CP*CP*T*GP*CP*AP*TP*CP*CP*GP*TP*GP*AP*GP*TP*CP*GP*AP*GP*GP*G)-3')
- Chain H
- DNA (5'-D(*TP*AP*TP*AP*AP*TP*GP*GP*GP*AP*GP*CP*TP*GP*TP*CP*AP*CP*GP*GP*AP*TP*GP*CP*AP*G*)-3')
Nearby chains
- Chain C
- DNA-directed RNA polymerase subunit beta
- Chain D
- DNA-directed RNA polymerase subunit beta'
Coloring options: