IL_6LQM_139

3D structure

PDB id

6LQM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

ACAU(PSU)U*AC(B8T)AU

Length

11 nucleotides

Bulged bases

6LQM|1|2|C|4670

QA status

Modified nucleotides: PSU, B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LQM|1|2|A|4624
6LQM|1|2|C|4625
6LQM|1|2|A|4626
6LQM|1|2|U|4627
6LQM|1|2|PSU|4628
6LQM|1|2|U|4629
*
6LQM|1|2|A|4669
6LQM|1|2|C|4670
6LQM|1|2|B8T|4671
6LQM|1|2|A|4672
6LQM|1|2|U|4673

Current chains

Chain 2

28S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain e

60S ribosomal protein L23

Chain f

60S ribosomal protein L24