IL_6LSS_024

3D structure

PDB id

6LSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state preA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GUGUCGGCG*CCCCGACC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSS|1|2|G|491
6LSS|1|2|U|492
6LSS|1|2|G|493
6LSS|1|2|U|494
6LSS|1|2|C|495
6LSS|1|2|G|496
6LSS|1|2|G|497
6LSS|1|2|C|498
6LSS|1|2|G|499
*
6LSS|1|2|C|655
6LSS|1|2|C|656
6LSS|1|2|C|657
6LSS|1|2|C|658
6LSS|1|2|G|659
6LSS|1|2|A|660
6LSS|1|2|C|661
6LSS|1|2|C|662

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4

Chain Z

60S ribosomal protein L18