IL_6LSS_032

3D structure

PDB id

6LSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a pre-60S ribosomal subunit - state preA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

CCGGCG*CCCCG

Length

11 nucleotides

Bulged bases

6LSS|1|2|C|738

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LSS|1|2|C|737
6LSS|1|2|C|738
6LSS|1|2|G|739
6LSS|1|2|G|740
6LSS|1|2|C|741
6LSS|1|2|G|742
*
6LSS|1|2|C|922
6LSS|1|2|C|923
6LSS|1|2|C|924
6LSS|1|2|C|925
6LSS|1|2|G|926

Current chains

Chain 2

28S rRNA

Nearby chains

Chain S

60S ribosomal protein L14

Chain b

60S ribosomal protein L18a