IL_6LT7_003
3D structure
- PDB id
- 6LT7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of human RPP20-RPP25 proteins in complex with the P3 domain of lncRNA RMRP
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CUACACACUG*CCCCUUUCCG
- Length
- 20 nucleotides
- Bulged bases
- 6LT7|1|C|U|29, 6LT7|1|C|A|30, 6LT7|1|C|C|31, 6LT7|1|C|C|33, 6LT7|1|C|C|35, 6LT7|1|C|U|36, 6LT7|1|C|C|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81392.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
6LT7|1|C|C|28
6LT7|1|C|U|29
6LT7|1|C|A|30
6LT7|1|C|C|31
6LT7|1|C|A|32
6LT7|1|C|C|33
6LT7|1|C|A|34
6LT7|1|C|C|35
6LT7|1|C|U|36
6LT7|1|C|G|37
*
6LT7|1|C|C|52
6LT7|1|C|C|53
6LT7|1|C|C|54
6LT7|1|C|C|55
6LT7|1|C|U|56
6LT7|1|C|U|57
6LT7|1|C|U|58
6LT7|1|C|C|59
6LT7|1|C|C|60
6LT7|1|C|G|61
Current chains
- Chain C
- 50-mer RNA
Nearby chains
- Chain A
- Ribonuclease P protein subunit p20
- Chain B
- Ribonuclease P protein subunit p25
- Chain E
- Ribonuclease P protein subunit p25
- Chain F
- 50-mer RNA
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