IL_6LU8_026

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GGCCCGGC*GUCC

Length

12 nucleotides

Bulged bases

6LU8|1|2|C|502, 6LU8|1|2|C|503, 6LU8|1|2|G|504

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|G|499
6LU8|1|2|G|500
6LU8|1|2|C|501
6LU8|1|2|C|502
6LU8|1|2|C|503
6LU8|1|2|G|504
6LU8|1|2|G|505
6LU8|1|2|C|506
*
6LU8|1|2|G|652
6LU8|1|2|U|653
6LU8|1|2|C|654
6LU8|1|2|C|655

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4

Chain L

60S ribosomal protein L27a

Chain Z

60S ribosomal protein L18