IL_6LU8_032

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

AAGG*CAGCAGCACU

Length

14 nucleotides

Bulged bases

6LU8|1|2|A|932, 6LU8|1|2|C|934, 6LU8|1|2|A|935, 6LU8|1|2|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|A|732
6LU8|1|2|A|733
6LU8|1|2|G|734
6LU8|1|2|G|735
*
6LU8|1|2|C|928
6LU8|1|2|A|929
6LU8|1|2|G|930
6LU8|1|2|C|931
6LU8|1|2|A|932
6LU8|1|2|G|933
6LU8|1|2|C|934
6LU8|1|2|A|935
6LU8|1|2|C|936
6LU8|1|2|U|937

Current chains

Chain 2

28S rRNA

Nearby chains

Chain D

60S ribosomal protein L4

Chain S

60S ribosomal protein L14

Chain b

60S ribosomal protein L18a