IL_6LU8_067

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

AC(B8H)UUUG*C(A2M)GAACU

Length

14 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: B8H, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|A|1858
6LU8|1|2|C|1859
6LU8|1|2|B8H|1860
6LU8|1|2|U|1861
6LU8|1|2|U|1862
6LU8|1|2|U|1863
6LU8|1|2|G|1864
*
6LU8|1|2|C|1870
6LU8|1|2|A2M|1871
6LU8|1|2|G|1872
6LU8|1|2|A|1873
6LU8|1|2|A|1874
6LU8|1|2|C|1875
6LU8|1|2|U|1876

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 4

Nucleolar GTP-binding protein 1

Chain 5

5S ribosomal RNA; 5S rRNA

Chain C

60S ribosomal protein L29

Chain R

Translation machinery-associated protein 16

Chain p

60S ribosomal protein L7