IL_6LU8_076
3D structure
- PDB id
- 6LU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-60S ribosomal subunit - state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- CCG*CG
- Length
- 5 nucleotides
- Bulged bases
- 6LU8|1|2|C|2084
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6LU8_076 not in the Motif Atlas
- Geometric match to IL_4C7O_003
- Geometric discrepancy: 0.2493
- The information below is about IL_4C7O_003
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 60
Unit IDs
6LU8|1|2|C|2083
6LU8|1|2|C|2084
6LU8|1|2|G|2085
*
6LU8|1|2|C|2272
6LU8|1|2|G|2273
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L4
- Chain Z
- 60S ribosomal protein L18
- Chain k
- 60S ribosomal protein L32
- Chain p
- 60S ribosomal protein L7
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