IL_6LU8_153

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

6LU8|1|2|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|U|5003
6LU8|1|2|C|5004
6LU8|1|2|G|5005
6LU8|1|2|U|5006
6LU8|1|2|A|5007
6LU8|1|2|C|5008
6LU8|1|2|G|5009
*
6LU8|1|2|U|5039
6LU8|1|2|U|5040
6LU8|1|2|G|5041
6LU8|1|2|A|5042
6LU8|1|2|A|5043
6LU8|1|2|A|5044

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 4

Nucleolar GTP-binding protein 1

Chain 7

Probable ribosome biogenesis protein RLP24

Chain B

60S ribosomal protein L3

Chain j

60S ribosomal protein L31