IL_6LU8_180
3D structure
- PDB id
- 6LU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-60S ribosomal subunit - state A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GGGGGCGAGCCCCGAGGGGCUCUCGCUUCUGGCGCCAA(B8W)*CGAC
- Length
- 43 nucleotides
- Bulged bases
- 6LU8|1|2|C|4096, 6LU8|1|2|G|4099, 6LU8|1|2|G|4104, 6LU8|1|2|C|4110, 6LU8|1|2|G|4115, 6LU8|1|2|C|4116, 6LU8|1|2|U|4117, 6LU8|1|2|U|4118, 6LU8|1|2|G|4121
- QA status
- Modified nucleotides: B8W
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6LU8|1|2|G|4091
6LU8|1|2|G|4092
6LU8|1|2|G|4093
6LU8|1|2|G|4094
6LU8|1|2|G|4095
6LU8|1|2|C|4096
6LU8|1|2|G|4097
6LU8|1|2|A|4098
6LU8|1|2|G|4099
6LU8|1|2|C|4100
6LU8|1|2|C|4101
6LU8|1|2|C|4102
6LU8|1|2|C|4103
6LU8|1|2|G|4104
6LU8|1|2|A|4105
6LU8|1|2|G|4106
6LU8|1|2|G|4107
6LU8|1|2|G|4108
6LU8|1|2|G|4109
6LU8|1|2|C|4110
6LU8|1|2|U|4111
6LU8|1|2|C|4112
6LU8|1|2|U|4113
6LU8|1|2|C|4114
6LU8|1|2|G|4115
6LU8|1|2|C|4116
6LU8|1|2|U|4117
6LU8|1|2|U|4118
6LU8|1|2|C|4119
6LU8|1|2|U|4120
6LU8|1|2|G|4121
6LU8|1|2|G|4122
6LU8|1|2|C|4123
6LU8|1|2|G|4124
6LU8|1|2|C|4125
6LU8|1|2|C|4126
6LU8|1|2|A|4127
6LU8|1|2|A|4128
6LU8|1|2|B8W|4129
*
6LU8|1|2|C|4155
6LU8|1|2|G|4156
6LU8|1|2|A|4157
6LU8|1|2|C|4158
Current chains
- Chain 2
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L30
- Chain F
- 60S ribosomal protein L34
- Chain G
- 60S ribosomal protein L7a
- Chain X
- 60S ribosomal protein L37a
- Chain g
- 60S ribosomal protein L23a
- Chain i
- 60S ribosomal protein L27
- Chain m
- 60S ribosomal protein L8
Coloring options: