IL_6LU8_182

3D structure

PDB id

6LU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a human pre-60S ribosomal subunit - state A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6LU8|1|2|C|4466
6LU8|1|2|A|4467
6LU8|1|2|U|4468
6LU8|1|2|U|4469
6LU8|1|2|G|4470
*
6LU8|1|2|C|4485
6LU8|1|2|C|4486
6LU8|1|2|A|4487
6LU8|1|2|A|4488
6LU8|1|2|G|4489
6LU8|1|2|C|4490
6LU8|1|2|G|4491

Current chains

Chain 2

28S rRNA

Nearby chains

Chain 4

Nucleolar GTP-binding protein 1

Chain B

60S ribosomal protein L3

Chain I

60S ribosomal protein L9

Chain e

60S ribosomal protein L23

Chain z

Protein LLP homolog