IL_6MEC_010

3D structure

PDB id

6MEC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a group II intron retroelement after DNA integration

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUCAGAAG*CACAG

Length

14 nucleotides

Bulged bases

6MEC|1|A|A|248, 6MEC|1|A|C|365

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MEC|1|A|U|244
6MEC|1|A|G|245
6MEC|1|A|U|246
6MEC|1|A|C|247
6MEC|1|A|A|248
6MEC|1|A|G|249
6MEC|1|A|A|250
6MEC|1|A|A|251
6MEC|1|A|G|252
*
6MEC|1|A|C|363
6MEC|1|A|A|364
6MEC|1|A|C|365
6MEC|1|A|A|366
6MEC|1|A|G|367

Current chains

Chain A

T.el4h RNA

Nearby chains

Chain C

Maturase reverse transcriptase