IL_6MKN_019
3D structure
- PDB id
- 6MKN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with an inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 2 (TRNAARG2) bound to an mRNA with an CGU-codon in the A-site and paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.46 Å
Loop
- Sequence
- CGUGCCAG*CGGUAAUACG
- Length
- 18 nucleotides
- Bulged bases
- 6MKN|1|A|A|532, 6MKN|1|A|U|534
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MKN|1|A|C|514
6MKN|1|A|G|515
6MKN|1|A|U|516
6MKN|1|A|G|517
6MKN|1|A|C|518
6MKN|1|A|C|519
6MKN|1|A|A|520
6MKN|1|A|G|521
*
6MKN|1|A|C|528
6MKN|1|A|G|529
6MKN|1|A|G|530
6MKN|1|A|U|531
6MKN|1|A|A|532
6MKN|1|A|A|533
6MKN|1|A|U|534
6MKN|1|A|A|535
6MKN|1|A|C|536
6MKN|1|A|G|537
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain L
- 30S ribosomal protein S12
- Chain W
- mRNA A-site fragment
- Chain X
- tRNA ASL Escherichia coli Arg2
Coloring options: