IL_6MPI_061
3D structure
- PDB id
- 6MPI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a 2-thiocytidine (s2C32) and inosine (I34) modified anticodon stem loop (ASL) of Escherichia coli transfer RNA Arginine 1 (TRNAARG1) bound to an mRNA with an CGU-codon in the A-site and paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.33 Å
Loop
- Sequence
- AGUUGCCAGC*GGGCACUCU
- Length
- 19 nucleotides
- Bulged bases
- 6MPI|1|A|U|1125, 6MPI|1|A|U|1126, 6MPI|1|A|C|1129
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MPI|1|A|A|1123
6MPI|1|A|G|1124
6MPI|1|A|U|1125
6MPI|1|A|U|1126
6MPI|1|A|G|1127
6MPI|1|A|C|1128
6MPI|1|A|C|1129
6MPI|1|A|A|1130
6MPI|1|A|G|1131
6MPI|1|A|C|1132
*
6MPI|1|A|G|1142
6MPI|1|A|G|1143
6MPI|1|A|G|1144
6MPI|1|A|C|1145
6MPI|1|A|A|1146
6MPI|1|A|C|1147
6MPI|1|A|U|1148
6MPI|1|A|C|1149
6MPI|1|A|U|1150
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
Coloring options: