IL_6MTB_096
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAUC*GG(B9B)AG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: B9B
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTB_096 not in the Motif Atlas
- Homologous match to IL_8P9A_295
- Geometric discrepancy: 0.2284
- The information below is about IL_8P9A_295
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_50730.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
6MTB|1|5|C|2589
6MTB|1|5|G|2590
6MTB|1|5|A|2591
6MTB|1|5|U|2592
6MTB|1|5|C|2593
*
6MTB|1|5|G|2752
6MTB|1|5|G|2753
6MTB|1|5|B9B|2754
6MTB|1|5|A|2755
6MTB|1|5|G|2756
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain G
- 60S ribosomal protein L7a
- Chain Z
- 60S ribosomal protein L27
- Chain g
- 60S ribosomal protein L34
Coloring options: