IL_6MTB_116

3D structure

PDB id

6MTB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

G(PSU)CA(A2M)AGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTB|1|5|G|3714
6MTB|1|5|PSU|3715
6MTB|1|5|C|3716
6MTB|1|5|A|3717
6MTB|1|5|A2M|3718
6MTB|1|5|A|3719
6MTB|1|5|G|3720
6MTB|1|5|U|3721
*
6MTB|1|5|A|3732
6MTB|1|5|A|3733
6MTB|1|5|U|3734
6MTB|1|5|G|3735
6MTB|1|5|A|3736
6MTB|1|5|A|3737
6MTB|1|5|G|3738
6MTB|1|5|C|3739

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 4

Transfer RNA; tRNA

Chain A

60S ribosomal protein L8

Chain i

60S ribosomal protein L36

Chain o

60S ribosomal protein L36a