3D structure

PDB id
6MTB (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
CAUGAGAA*UCUGAUCG
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6MTB|1|5|C|3948
6MTB|1|5|A|3949
6MTB|1|5|U|3950
6MTB|1|5|G|3951
6MTB|1|5|A|3952
6MTB|1|5|G|3953
6MTB|1|5|A|3954
6MTB|1|5|A|3955
*
6MTB|1|5|U|4058
6MTB|1|5|C|4059
6MTB|1|5|U|4060
6MTB|1|5|G|4061
6MTB|1|5|A|4062
6MTB|1|5|U|4063
6MTB|1|5|C|4064
6MTB|1|5|G|4065

Current chains

Chain 5
28S rRNA

Nearby chains

Chain i
60S ribosomal protein L36
Chain u
60S ribosomal protein L10a

Coloring options:

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