IL_6MTB_180
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAAA*UGA(OMC)G
- Length
- 9 nucleotides
- Bulged bases
- 6MTB|1|9|A|516
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTB_180 not in the Motif Atlas
- Geometric match to IL_4WF9_016
- Geometric discrepancy: 0.3274
- The information below is about IL_4WF9_016
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
6MTB|1|9|C|37
6MTB|1|9|A|38
6MTB|1|9|A|39
6MTB|1|9|A|40
*
6MTB|1|9|U|514
6MTB|1|9|G|515
6MTB|1|9|A|516
6MTB|1|9|OMC|517
6MTB|1|9|G|518
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4, X isoform
- Chain JJ
- 40S ribosomal protein S9
- Chain YY
- 40S ribosomal protein S24
Coloring options: