IL_6MTB_273

3D structure

PDB id

6MTB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

6MTB|1|5|G|119, 6MTB|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTB|1|5|C|118
6MTB|1|5|G|119
6MTB|1|5|A|120
6MTB|1|5|A|121
6MTB|1|5|U|122
*
6MTB|1|5|A|147
6MTB|1|5|A|148
6MTB|1|5|A|149
6MTB|1|5|U|150
6MTB|1|5|G|151
6MTB|1|5|U|152
6MTB|1|5|G|153

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

60S ribosomal protein L7a

Chain N

60S ribosomal protein L15

Chain h

60S ribosomal protein L35