IL_6MTB_292
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GCGA*UCU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTB_292 not in the Motif Atlas
- Geometric match to IL_4V87_185
- Geometric discrepancy: 0.3182
- The information below is about IL_4V87_185
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09990.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
6MTB|1|5|G|4095
6MTB|1|5|C|4096
6MTB|1|5|G|4097
6MTB|1|5|A|4098
*
6MTB|1|5|U|4111
6MTB|1|5|C|4112
6MTB|1|5|U|4113
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain A
- 60S ribosomal protein L8
- Chain BB
- 40S ribosomal protein S3a
- Chain G
- 60S ribosomal protein L7a
- Chain g
- 60S ribosomal protein L34
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