IL_6MTB_307
3D structure
- PDB id
- 6MTB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UGCAU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 6MTB|1|9|C|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTB_307 not in the Motif Atlas
- Geometric match to IL_4V88_450
- Geometric discrepancy: 0.1575
- The information below is about IL_4V88_450
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_76319.2
- Basepair signature
- cWW-L-cWS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6MTB|1|9|U|1329
6MTB|1|9|G|1330
6MTB|1|9|C|1331
6MTB|1|9|A|1332
6MTB|1|9|U|1333
*
6MTB|1|9|A|1498
6MTB|1|9|U|1499
6MTB|1|9|G|1500
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain DD
- 40S ribosomal protein S3
- Chain KK
- 40S ribosomal protein S10
- Chain UU
- 40S ribosomal protein S20
- Chain dd
- 40S ribosomal protein S29
- Chain ff
- 40S ribosomal protein S27a
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