IL_6MTC_035

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

6MTC|1|5|A|932, 6MTC|1|5|C|934, 6MTC|1|5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|A|732
6MTC|1|5|A|733
6MTC|1|5|G|734
6MTC|1|5|G|735
*
6MTC|1|5|C|928
6MTC|1|5|A|929
6MTC|1|5|G|930
6MTC|1|5|C|931
6MTC|1|5|A|932
6MTC|1|5|G|933
6MTC|1|5|C|934
6MTC|1|5|A|935
6MTC|1|5|G|935|||A
6MTC|1|5|C|936
6MTC|1|5|U|937

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

60S ribosomal protein L4

Chain M

60S ribosomal protein L14

Chain S

60S ribosomal protein L18a

Chain f

60S ribosomal protein L35a