IL_6MTC_130
3D structure
- PDB id
- 6MTC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 6MTC|1|5|A|4203
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6MTC_130 not in the Motif Atlas
- Homologous match to IL_5TBW_098
- Geometric discrepancy: 0.0907
- The information below is about IL_5TBW_098
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
6MTC|1|5|G|4191
6MTC|1|5|A|4192
*
6MTC|1|5|U|4202
6MTC|1|5|A|4203
6MTC|1|5|C|4204
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain I
- 60S ribosomal protein L10
- Chain T
- 60S ribosomal protein L21
- Chain b
- 60S ribosomal protein L29
- Chain o
- 60S ribosomal protein L36a
- Chain v
- Interferon-related developmental regulator 2
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