IL_6MTC_135

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)CC

Length

12 nucleotides

Bulged bases

6MTC|1|5|C|4443

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|G|4400
6MTC|1|5|G|4401
6MTC|1|5|C|4402
6MTC|1|5|PSU|4403
6MTC|1|5|U|4404
6MTC|1|5|G|4405
*
6MTC|1|5|U|4439
6MTC|1|5|G|4440
6MTC|1|5|A|4441
6MTC|1|5|PSU|4442
6MTC|1|5|C|4443
6MTC|1|5|C|4444

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

60S ribosomal protein L3

Chain I

60S ribosomal protein L10

Chain b

60S ribosomal protein L29