IL_6MTC_188

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6MTC|1|9|C|142

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|9|G|130
6MTC|1|9|U|140
6MTC|1|9|A|141
6MTC|1|9|C|142
6MTC|1|9|U|143
6MTC|1|9|U|144
*
6MTC|1|9|A|175
6MTC|1|9|U|176
6MTC|1|9|G|177
6MTC|1|9|C|178
6MTC|1|9|C|179
6MTC|1|9|G|180
6MTC|1|9|A|181
6MTC|1|9|C|182

Current chains

Chain 9

18S rRNA

Nearby chains

Chain GG

40S ribosomal protein S6

Chain W

60S ribosomal protein L24