IL_6MTC_242

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AUUG*CUCGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|9|A|1287
6MTC|1|9|U|1288
6MTC|1|9|U|1289
6MTC|1|9|G|1290
*
6MTC|1|9|C|1309
6MTC|1|9|U|1310
6MTC|1|9|C|1311
6MTC|1|9|G|1312
6MTC|1|9|A|1313
6MTC|1|9|U|1314

Current chains

Chain 9

18S rRNA

Nearby chains

Chain KK

40S ribosomal protein S10

Chain MM

40S ribosomal protein S12

Chain dd

40S ribosomal protein S29

Chain ff

40S ribosomal protein S27a