IL_6MTC_295

3D structure

PDB id

6MTC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GGAAACGGG*CUCUCGCC

Length

17 nucleotides

Bulged bases

6MTC|1|5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTC|1|5|G|4890
6MTC|1|5|G|4891
6MTC|1|5|A|4892
6MTC|1|5|A|4893
6MTC|1|5|A|4894
6MTC|1|5|C|4895
6MTC|1|5|G|4896
6MTC|1|5|G|4897
6MTC|1|5|G|4898
*
6MTC|1|5|C|4922
6MTC|1|5|U|4923
6MTC|1|5|C|4924
6MTC|1|5|U|4925
6MTC|1|5|C|4926
6MTC|1|5|G|4927
6MTC|1|5|C|4928
6MTC|1|5|C|4929

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain M

60S ribosomal protein L14

Chain O

60S ribosomal protein L13a