IL_6MTD_074

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UUAA(P7G)G*CCCAUA

Length

12 nucleotides

Bulged bases

6MTD|1|5|U|2070

QA status

Modified nucleotides: P7G

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|5|U|1905
6MTD|1|5|U|1906
6MTD|1|5|A|1907
6MTD|1|5|A|1908
6MTD|1|5|P7G|1909
6MTD|1|5|G|1910
*
6MTD|1|5|C|2066
6MTD|1|5|C|2067
6MTD|1|5|C|2068
6MTD|1|5|A|2069
6MTD|1|5|U|2070
6MTD|1|5|A|2071

Current chains

Chain 5

28S rRNA

Nearby chains

Chain 7

5S ribosomal RNA; 5S rRNA

Chain F

uL30

Chain Q

eL18

Chain e

eL32

Chain f

eL33