IL_6MTD_127

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUGUAGAAUAAGUGG*CACUAC

Length

21 nucleotides

Bulged bases

6MTD|1|5|A|3962

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|5|G|3956
6MTD|1|5|U|3957
6MTD|1|5|G|3958
6MTD|1|5|U|3959
6MTD|1|5|A|3960
6MTD|1|5|G|3961
6MTD|1|5|A|3962
6MTD|1|5|A|3963
6MTD|1|5|U|3964
6MTD|1|5|A|3965
6MTD|1|5|A|3966
6MTD|1|5|G|3967
6MTD|1|5|U|3968
6MTD|1|5|G|3969
6MTD|1|5|G|3970
*
6MTD|1|5|C|4052
6MTD|1|5|A|4053
6MTD|1|5|C|4054
6MTD|1|5|U|4055
6MTD|1|5|A|4056
6MTD|1|5|C|4057

Current chains

Chain 5

28S rRNA

Nearby chains

Chain i

eL36

Chain u

uL1