IL_6MTD_150

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

ACAU(PSU)U*AC(B8T)AU

Length

11 nucleotides

Bulged bases

6MTD|1|5|C|4670

QA status

Modified nucleotides: PSU, B8T

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|5|A|4624
6MTD|1|5|C|4625
6MTD|1|5|A|4626
6MTD|1|5|U|4627
6MTD|1|5|PSU|4628
6MTD|1|5|U|4629
*
6MTD|1|5|A|4669
6MTD|1|5|C|4670
6MTD|1|5|B8T|4671
6MTD|1|5|A|4672
6MTD|1|5|U|4673

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

uL3

Chain V

uL14

Chain W

eL24