IL_6MTD_159

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAAACG*CUCGCC

Length

13 nucleotides

Bulged bases

6MTD|1|5|C|4895

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|5|G|4890
6MTD|1|5|G|4891
6MTD|1|5|A|4892
6MTD|1|5|A|4893
6MTD|1|5|A|4894
6MTD|1|5|C|4895
6MTD|1|5|G|4896
*
6MTD|1|5|C|4924
6MTD|1|5|U|4925
6MTD|1|5|C|4926
6MTD|1|5|G|4927
6MTD|1|5|C|4928
6MTD|1|5|C|4929

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

eL6

Chain M

eL14

Chain O

uL13