IL_6MTD_188

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GUACUU*AUGCCGAC

Length

14 nucleotides

Bulged bases

6MTD|1|9|C|142

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|9|G|130
6MTD|1|9|U|140
6MTD|1|9|A|141
6MTD|1|9|C|142
6MTD|1|9|U|143
6MTD|1|9|U|144
*
6MTD|1|9|A|175
6MTD|1|9|U|176
6MTD|1|9|G|177
6MTD|1|9|C|178
6MTD|1|9|C|179
6MTD|1|9|G|180
6MTD|1|9|A|181
6MTD|1|9|C|182

Current chains

Chain 9

18S rRNA

Nearby chains

Chain GG

eS6