IL_6MTD_209
3D structure
- PDB id
- 6MTD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUCUGGUGCCAG*CGGUAAUUCCAGC
- Length
- 25 nucleotides
- Bulged bases
- 6MTD|1|9|U|607, 6MTD|1|9|A|628, 6MTD|1|9|U|630
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6MTD|1|9|G|606
6MTD|1|9|U|607
6MTD|1|9|C|608
6MTD|1|9|U|609
6MTD|1|9|G|610
6MTD|1|9|G|611
6MTD|1|9|U|612
6MTD|1|9|G|613
6MTD|1|9|C|614
6MTD|1|9|C|615
6MTD|1|9|A|616
6MTD|1|9|G|617
*
6MTD|1|9|C|624
6MTD|1|9|G|625
6MTD|1|9|G|626
6MTD|1|9|U|627
6MTD|1|9|A|628
6MTD|1|9|A|629
6MTD|1|9|U|630
6MTD|1|9|U|631
6MTD|1|9|C|632
6MTD|1|9|C|633
6MTD|1|9|A|634
6MTD|1|9|G|635
6MTD|1|9|C|636
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain DD
- uS3
- Chain JJ
- uS4
- Chain XX
- uS12
- Chain ee
- eS30
- Chain v
- eEF2
- Chain w
- SERBP1
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