IL_6MTD_241

3D structure

PDB id

6MTD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (unrotated state with 40S head swivel)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACAGGA*UUC

Length

10 nucleotides

Bulged bases

6MTD|1|9|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTD|1|9|G|1281
6MTD|1|9|A|1282
6MTD|1|9|C|1283
6MTD|1|9|A|1284
6MTD|1|9|G|1285
6MTD|1|9|G|1286
6MTD|1|9|A|1287
*
6MTD|1|9|U|1314
6MTD|1|9|U|1315
6MTD|1|9|C|1316

Current chains

Chain 9

18S rRNA

Nearby chains

Chain KK

eS10

Chain MM

eS12

Chain ff

eS31