IL_6MTE_034

3D structure

PDB id

6MTE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome with eEF2 and SERBP1 (rotated state)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAGG*CAGCAGCAGCU

Length

15 nucleotides

Bulged bases

6MTE|1|5|A|932, 6MTE|1|5|A|935, 6MTE|1|5|C|936

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6MTE|1|5|A|732
6MTE|1|5|A|733
6MTE|1|5|G|734
6MTE|1|5|G|735
*
6MTE|1|5|C|928
6MTE|1|5|A|929
6MTE|1|5|G|930
6MTE|1|5|C|931
6MTE|1|5|A|932
6MTE|1|5|G|933
6MTE|1|5|C|934
6MTE|1|5|A|935
6MTE|1|5|G|935|||A
6MTE|1|5|C|936
6MTE|1|5|U|937

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain M

eL14

Chain S

eL20

Chain f

eL33